Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc4Q99J62 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
Rfc4Q99J62 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.76□□□□□ -0.05
Rfc4Q99J62 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Rfc4Q99J62 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.76□□□□□ -0.05
Rfc4Q99J62 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.76□□□□□ -0.05
Rfc4Q99J62 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Rfc4Q99J62 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc4Q99J62 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc4Q99J62 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc4Q99J62 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.76□□□□□ -0.05
Rfc4Q99J62 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc4Q99J62 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rfc4Q99J62 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rfc4Q99J62 Gm10312-201ENSMUST00000078515 489 ntBASIC14.76□□□□□ -0.05
Rfc4Q99J62 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc4Q99J62 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Rfc4Q99J62 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Rfc4Q99J62 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc4Q99J62 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc4Q99J62 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.76□□□□□ -0.05
Rfc4Q99J62 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rfc4Q99J62 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfc4Q99J62 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfc4Q99J62 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfc4Q99J62 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.75□□□□□ -0.05
Rfc4Q99J62 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfc4Q99J62 Gm13736-201ENSMUST00000119272 253 ntBASIC14.75□□□□□ -0.05
Rfc4Q99J62 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.75□□□□□ -0.05
Rfc4Q99J62 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfc4Q99J62 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.75□□□□□ -0.05
Rfc4Q99J62 Gm5523-201ENSMUST00000180415 997 ntBASIC14.75□□□□□ -0.05
Rfc4Q99J62 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.75□□□□□ -0.05
Rfc4Q99J62 Gm19931-201ENSMUST00000198920 368 ntBASIC14.75□□□□□ -0.05
Rfc4Q99J62 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfc4Q99J62 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rfc4Q99J62 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.75□□□□□ -0.05
Rfc4Q99J62 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.75□□□□□ -0.05
Rfc4Q99J62 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfc4Q99J62 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfc4Q99J62 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfc4Q99J62 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfc4Q99J62 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rfc4Q99J62 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfc4Q99J62 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rfc4Q99J62 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Rfc4Q99J62 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.75□□□□□ -0.05
Rfc4Q99J62 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfc4Q99J62 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Rfc4Q99J62 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.74□□□□□ -0.05
Rfc4Q99J62 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Gm23200-201ENSMUST00000104379 132 ntBASIC14.74□□□□□ -0.05
Rfc4Q99J62 Mir874-201ENSMUST00000104769 76 ntBASIC14.74□□□□□ -0.05
Rfc4Q99J62 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.74□□□□□ -0.05
Rfc4Q99J62 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.74□□□□□ -0.05
Rfc4Q99J62 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Gm29787-201ENSMUST00000222129 849 ntBASIC14.74□□□□□ -0.05
Rfc4Q99J62 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.74□□□□□ -0.05
Rfc4Q99J62 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.74□□□□□ -0.05
Rfc4Q99J62 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.74□□□□□ -0.05
Rfc4Q99J62 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rfc4Q99J62 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfc4Q99J62 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms