Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha9Q91Y11 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Gm13492-201ENSMUST00000119772 665 ntBASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Gm37424-201ENSMUST00000191727 561 ntBASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdha9Q91Y11 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Gm5187-201ENSMUST00000117317 991 ntBASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Gm12502-201ENSMUST00000120197 444 ntBASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Gm3890-201ENSMUST00000182416 207 ntBASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 250.7 ms