Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retreg1dQ8VE91 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Retreg1dQ8VE91 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Gm22018-201ENSMUST00000104357 131 ntBASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Gm26927-201ENSMUST00000182385 965 ntBASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retreg1dQ8VE91 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Gm15198-201ENSMUST00000117283 177 ntBASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Gm6013-201ENSMUST00000212264 699 ntBASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Gm18041-201ENSMUST00000218210 618 ntBASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retreg1dQ8VE91 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retreg1dQ8VE91 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms