Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Gm13813-201ENSMUST00000120998 787 ntBASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Gm12091-201ENSMUST00000146791 830 ntBASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.85□□□□□ -0.35
Vps39Q8R5L3 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.85□□□□□ -0.35
Vps39Q8R5L3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vps39Q8R5L3 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Gm13612-201ENSMUST00000119276 390 ntBASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Vps39Q8R5L3 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Vps39Q8R5L3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Vps39Q8R5L3 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Vps39Q8R5L3 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Vps39Q8R5L3 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Vps39Q8R5L3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Gm12291-201ENSMUST00000121627 311 ntBASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.83□□□□□ -0.36
Vps39Q8R5L3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Vps39Q8R5L3 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms