Protein–RNA interactions for Protein: Q8R2N0

Ccdc59, Thyroid transcription factor 1-associated protein 26, mousemouse

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc59Q8R2N0 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Gm5354-201ENSMUST00000182417 973 ntBASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc59Q8R2N0 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Gm12091-201ENSMUST00000146791 830 ntBASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc59Q8R2N0 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 Gm12490-201ENSMUST00000120255 560 ntBASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc59Q8R2N0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms