Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Chmp7Q8R1T1 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Gm13813-201ENSMUST00000120998 787 ntBASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 AC166344.1-202ENSMUST00000224139 234 ntBASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Gzmn-202ENSMUST00000225535 989 ntBASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Gm45495-201ENSMUST00000200940 1700 ntBASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp7Q8R1T1 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 AC154262.2-201ENSMUST00000224310 2293 ntBASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Gm13296-201ENSMUST00000117854 997 ntBASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Gm14832-201ENSMUST00000121289 322 ntBASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Gm24845-201ENSMUST00000158034 109 ntBASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Gm28450-201ENSMUST00000187349 638 ntBASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Gm45691-201ENSMUST00000206905 1120 ntBASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Gm45224-201ENSMUST00000208203 414 ntBASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Chmp7Q8R1T1 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Gm13996-201ENSMUST00000118456 430 ntBASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Gm12566-201ENSMUST00000121479 359 ntBASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Rprl1-202ENSMUST00000198476 238 ntBASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms