Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Gm14701-201ENSMUST00000117156 348 ntBASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nudcd3Q8R1N4 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Gm21854-201ENSMUST00000179901 471 ntBASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nudcd3Q8R1N4 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Paupar-201ENSMUST00000194826 3482 ntBASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Gm26308-201ENSMUST00000157768 69 ntBASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Gm44124-201ENSMUST00000204159 472 ntBASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms