Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 AC159195.1-201ENSMUST00000225867 2086 ntBASIC15.12■□□□□ 0.01
Atf7Q8R0S1 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.12■□□□□ 0.01
Atf7Q8R0S1 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 Gm44942-201ENSMUST00000096093 2072 ntBASIC15.12■□□□□ 0.01
Atf7Q8R0S1 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Atf7Q8R0S1 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Gm6992-201ENSMUST00000217973 1607 ntBASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Gm12390-201ENSMUST00000117897 397 ntBASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Gm27682-201ENSMUST00000183930 110 ntBASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf7Q8R0S1 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Gm15897-201ENSMUST00000117770 1486 ntBASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Gm17150-201ENSMUST00000165577 381 ntBASIC15.1■□□□□ 0.01
Atf7Q8R0S1 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Gm43463-201ENSMUST00000195967 1803 ntBASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf7Q8R0S1 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Atf7Q8R0S1 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms