Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Smc5Q8CG46 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smc5Q8CG46 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smc5Q8CG46 Gm44806-201ENSMUST00000205574 2303 ntBASIC15.83■□□□□ 0.12
Smc5Q8CG46 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Gm8805-201ENSMUST00000117848 313 ntBASIC15.83■□□□□ 0.12
Smc5Q8CG46 Gm11618-201ENSMUST00000117946 267 ntBASIC15.83■□□□□ 0.12
Smc5Q8CG46 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Gm22121-201ENSMUST00000175148 54 ntBASIC15.83■□□□□ 0.12
Smc5Q8CG46 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Gm43416-201ENSMUST00000201916 1015 ntBASIC15.83■□□□□ 0.12
Smc5Q8CG46 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.83■□□□□ 0.12
Smc5Q8CG46 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.83■□□□□ 0.12
Smc5Q8CG46 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Gm10371-202ENSMUST00000228010 1081 ntBASIC15.83■□□□□ 0.12
Smc5Q8CG46 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC15.83■□□□□ 0.12
Smc5Q8CG46 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Smc5Q8CG46 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc5Q8CG46 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smc5Q8CG46 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smc5Q8CG46 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Proscos-202ENSMUST00000178990 666 ntBASIC15.82■□□□□ 0.12
Smc5Q8CG46 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smc5Q8CG46 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.82■□□□□ 0.12
Smc5Q8CG46 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc5Q8CG46 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Gm44831-201ENSMUST00000208469 2989 ntBASIC15.82■□□□□ 0.12
Smc5Q8CG46 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC15.82■□□□□ 0.12
Smc5Q8CG46 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smc5Q8CG46 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.82■□□□□ 0.12
Smc5Q8CG46 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smc5Q8CG46 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc5Q8CG46 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc5Q8CG46 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc5Q8CG46 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc5Q8CG46 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smc5Q8CG46 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Smc5Q8CG46 Gm12859-201ENSMUST00000117834 427 ntBASIC15.81■□□□□ 0.12
Smc5Q8CG46 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc5Q8CG46 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.81■□□□□ 0.12
Smc5Q8CG46 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Smc5Q8CG46 Gm15703-201ENSMUST00000120250 880 ntBASIC15.81■□□□□ 0.12
Smc5Q8CG46 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smc5Q8CG46 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc5Q8CG46 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smc5Q8CG46 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smc5Q8CG46 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.81■□□□□ 0.12
Smc5Q8CG46 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.81■□□□□ 0.12
Smc5Q8CG46 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.81■□□□□ 0.12
Smc5Q8CG46 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Smc5Q8CG46 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc5Q8CG46 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Smc5Q8CG46 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc5Q8CG46 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.81■□□□□ 0.12
Smc5Q8CG46 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms