Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.63□□□□□ -0.23
Ccdc87Q8CDL9 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Gm6447-201ENSMUST00000118905 835 ntBASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Gm15376-201ENSMUST00000122258 783 ntBASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Gm26464-201ENSMUST00000157094 305 ntBASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Gm27701-201ENSMUST00000184498 110 ntBASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc87Q8CDL9 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Gm28911-201ENSMUST00000188837 117 ntBASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc87Q8CDL9 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Gm44124-201ENSMUST00000204159 472 ntBASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc87Q8CDL9 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms