Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pabpn1Q8CCS6 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Gm18210-201ENSMUST00000209001 1524 ntBASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Gm24844-201ENSMUST00000158679 127 ntBASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Gm7211-201ENSMUST00000172692 1118 ntBASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Gm6423-201ENSMUST00000204315 934 ntBASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 AC107763.1-201ENSMUST00000226082 1365 ntBASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pabpn1Q8CCS6 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Gm11996-201ENSMUST00000117538 915 ntBASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Gm16305-201ENSMUST00000140747 556 ntBASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 AC238811.4-201ENSMUST00000178019 1246 ntBASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 AC238940.3-201ENSMUST00000178830 1246 ntBASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Gm26982-201ENSMUST00000182250 1151 ntBASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Gm5705-201ENSMUST00000066241 711 ntBASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pabpn1Q8CCS6 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pabpn1Q8CCS6 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pabpn1Q8CCS6 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Pabpn1Q8CCS6 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Pabpn1Q8CCS6 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pabpn1Q8CCS6 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pabpn1Q8CCS6 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC19.41■□□□□ 0.7
Pabpn1Q8CCS6 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pabpn1Q8CCS6 Gm25053-201ENSMUST00000103982 133 ntBASIC19.41■□□□□ 0.7
Pabpn1Q8CCS6 Gm25922-201ENSMUST00000104281 130 ntBASIC19.41■□□□□ 0.7
Pabpn1Q8CCS6 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC19.41■□□□□ 0.7
Pabpn1Q8CCS6 Gm24679-201ENSMUST00000158762 111 ntBASIC19.41■□□□□ 0.7
Pabpn1Q8CCS6 Gm25053-202ENSMUST00000199731 132 ntBASIC19.41■□□□□ 0.7
Pabpn1Q8CCS6 Gm18123-201ENSMUST00000210874 822 ntBASIC19.41■□□□□ 0.7
Pabpn1Q8CCS6 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Pabpn1Q8CCS6 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pabpn1Q8CCS6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pabpn1Q8CCS6 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pabpn1Q8CCS6 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pabpn1Q8CCS6 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pabpn1Q8CCS6 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pabpn1Q8CCS6 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pabpn1Q8CCS6 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
Pabpn1Q8CCS6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pabpn1Q8CCS6 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
Pabpn1Q8CCS6 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pabpn1Q8CCS6 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pabpn1Q8CCS6 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pabpn1Q8CCS6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pabpn1Q8CCS6 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Pabpn1Q8CCS6 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pabpn1Q8CCS6 Gm14270-201ENSMUST00000118388 846 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms