Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Prpf31Q8CCF0 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.04□□□□□ -0.16
Prpf31Q8CCF0 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.04□□□□□ -0.16
Prpf31Q8CCF0 Cts7-204ENSMUST00000225321 1257 ntBASIC14.04□□□□□ -0.16
Prpf31Q8CCF0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf31Q8CCF0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Prpf31Q8CCF0 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf31Q8CCF0 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf31Q8CCF0 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf31Q8CCF0 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf31Q8CCF0 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf31Q8CCF0 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf31Q8CCF0 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf31Q8CCF0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf31Q8CCF0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf31Q8CCF0 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf31Q8CCF0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Gm6621-201ENSMUST00000193251 772 ntBASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Gm43758-201ENSMUST00000199500 367 ntBASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Mir339-201ENSMUST00000083659 96 ntBASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Prpf31Q8CCF0 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf31Q8CCF0 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf31Q8CCF0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf31Q8CCF0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf31Q8CCF0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf31Q8CCF0 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf31Q8CCF0 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Prpf31Q8CCF0 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.02□□□□□ -0.16
Prpf31Q8CCF0 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.02□□□□□ -0.16
Prpf31Q8CCF0 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf31Q8CCF0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf31Q8CCF0 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf31Q8CCF0 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf31Q8CCF0 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Prpf31Q8CCF0 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Prpf31Q8CCF0 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 Gm7584-201ENSMUST00000175829 940 ntBASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 Gm44364-201ENSMUST00000198368 141 ntBASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 Morn2-202ENSMUST00000227729 656 ntBASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf31Q8CCF0 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf31Q8CCF0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf31Q8CCF0 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf31Q8CCF0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf31Q8CCF0 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf31Q8CCF0 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf31Q8CCF0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf31Q8CCF0 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Prpf31Q8CCF0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf31Q8CCF0 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Prpf31Q8CCF0 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf31Q8CCF0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms