Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Gm7029-201ENSMUST00000173226 450 ntBASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Gm19931-201ENSMUST00000198920 368 ntBASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Gm6458-201ENSMUST00000211573 635 ntBASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Gm10268-201ENSMUST00000085340 555 ntBASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Srrm4Q8BKA3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Gm11637-201ENSMUST00000120601 592 ntBASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Gm16479-201ENSMUST00000121706 932 ntBASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Snora78-201ENSMUST00000158630 128 ntBASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Srrm4Q8BKA3 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Srrm4Q8BKA3 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.12□□□□□ -0.63
Srrm4Q8BKA3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Srrm4Q8BKA3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Srrm4Q8BKA3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Srrm4Q8BKA3 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Srrm4Q8BKA3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Srrm4Q8BKA3 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Srrm4Q8BKA3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Srrm4Q8BKA3 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.12□□□□□ -0.63
Srrm4Q8BKA3 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Srrm4Q8BKA3 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms