Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Gm27682-201ENSMUST00000183930 110 ntBASIC12.69□□□□□ -0.38
Ubp1Q811S7 Gm45784-201ENSMUST00000188360 142 ntBASIC12.69□□□□□ -0.38
Ubp1Q811S7 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.69□□□□□ -0.38
Ubp1Q811S7 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.69□□□□□ -0.38
Ubp1Q811S7 Gm43452-201ENSMUST00000201873 991 ntBASIC12.69□□□□□ -0.38
Ubp1Q811S7 Gm18062-201ENSMUST00000208020 547 ntBASIC12.69□□□□□ -0.38
Ubp1Q811S7 Gm18055-201ENSMUST00000208254 547 ntBASIC12.69□□□□□ -0.38
Ubp1Q811S7 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.69□□□□□ -0.38
Ubp1Q811S7 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.69□□□□□ -0.38
Ubp1Q811S7 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubp1Q811S7 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Gm17208-201ENSMUST00000168388 535 ntBASIC12.68□□□□□ -0.38
Ubp1Q811S7 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.68□□□□□ -0.38
Ubp1Q811S7 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.68□□□□□ -0.38
Ubp1Q811S7 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.68□□□□□ -0.38
Ubp1Q811S7 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.68□□□□□ -0.38
Ubp1Q811S7 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.68□□□□□ -0.38
Ubp1Q811S7 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.68□□□□□ -0.38
Ubp1Q811S7 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubp1Q811S7 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubp1Q811S7 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.67□□□□□ -0.38
Ubp1Q811S7 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.67□□□□□ -0.38
Ubp1Q811S7 Gm12384-201ENSMUST00000119228 919 ntBASIC12.67□□□□□ -0.38
Ubp1Q811S7 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ubp1Q811S7 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms