Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp6nlQ80XC3 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp6nlQ80XC3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Usp6nlQ80XC3 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp6nlQ80XC3 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp6nlQ80XC3 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Usp6nlQ80XC3 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp6nlQ80XC3 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.16□□□□□ -0.14
Usp6nlQ80XC3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.16□□□□□ -0.14
Usp6nlQ80XC3 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp6nlQ80XC3 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp6nlQ80XC3 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp6nlQ80XC3 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp6nlQ80XC3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Gm28450-201ENSMUST00000187349 638 ntBASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Gm8385-201ENSMUST00000058999 643 ntBASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp6nlQ80XC3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Gm23200-201ENSMUST00000104379 132 ntBASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Mir874-201ENSMUST00000104769 76 ntBASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Gm9083-201ENSMUST00000120423 819 ntBASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Gm45224-201ENSMUST00000208203 414 ntBASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Usp6nlQ80XC3 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms