Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pif1Q80SX8 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.91□□□□□ -0.5
Pif1Q80SX8 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.91□□□□□ -0.5
Pif1Q80SX8 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Mir874-201ENSMUST00000104769 76 ntBASIC11.91□□□□□ -0.5
Pif1Q80SX8 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.91□□□□□ -0.5
Pif1Q80SX8 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Gm18753-201ENSMUST00000201000 566 ntBASIC11.91□□□□□ -0.5
Pif1Q80SX8 Gm5363-201ENSMUST00000211927 938 ntBASIC11.91□□□□□ -0.5
Pif1Q80SX8 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.91□□□□□ -0.5
Pif1Q80SX8 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Pif1Q80SX8 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pif1Q80SX8 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Gm14726-201ENSMUST00000120623 896 ntBASIC11.9□□□□□ -0.5
Pif1Q80SX8 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Gm11978-201ENSMUST00000122315 466 ntBASIC11.9□□□□□ -0.5
Pif1Q80SX8 Gm13316-201ENSMUST00000140537 691 ntBASIC11.9□□□□□ -0.5
Pif1Q80SX8 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Gm26956-201ENSMUST00000182176 986 ntBASIC11.9□□□□□ -0.5
Pif1Q80SX8 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.9□□□□□ -0.5
Pif1Q80SX8 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pif1Q80SX8 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Gm30285-201ENSMUST00000214614 422 ntBASIC11.9□□□□□ -0.5
Pif1Q80SX8 Gm7441-201ENSMUST00000220697 1074 ntBASIC11.9□□□□□ -0.5
Pif1Q80SX8 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.9□□□□□ -0.5
Pif1Q80SX8 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pif1Q80SX8 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pif1Q80SX8 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pif1Q80SX8 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Pif1Q80SX8 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pif1Q80SX8 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pif1Q80SX8 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms