Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ubfd1Q78JW9 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Gm20482-202ENSMUST00000174729 825 ntBASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Gm27243-201ENSMUST00000183964 521 ntBASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Gm45925-201ENSMUST00000218882 744 ntBASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubfd1Q78JW9 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Gm14726-201ENSMUST00000120623 896 ntBASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Gm2546-201ENSMUST00000182630 991 ntBASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Gm30285-201ENSMUST00000214614 422 ntBASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.49□□□□□ -0.41
Ubfd1Q78JW9 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms