Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 Gm13786-201ENSMUST00000122371 333 ntBASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 Gm28693-202ENSMUST00000190758 331 ntBASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hmgb4Q6P8W9 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hmgb4Q6P8W9 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.46□□□□□ -0.26
Hmgb4Q6P8W9 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Hmgb4Q6P8W9 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hmgb4Q6P8W9 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hmgb4Q6P8W9 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hmgb4Q6P8W9 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hmgb4Q6P8W9 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Hmgb4Q6P8W9 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Gm3890-201ENSMUST00000182416 207 ntBASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Gm4857-201ENSMUST00000192718 785 ntBASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Gm6621-201ENSMUST00000193251 772 ntBASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Gm8227-201ENSMUST00000223306 571 ntBASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hmgb4Q6P8W9 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 Gm26083-201ENSMUST00000157904 193 ntBASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hmgb4Q6P8W9 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms