Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Gm37497-201ENSMUST00000195830 798 ntBASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sp140Q6NSQ5 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13□□□□□ -0.33
Sp140Q6NSQ5 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Gm10146-201ENSMUST00000072739 309 ntBASIC13□□□□□ -0.33
Sp140Q6NSQ5 Mir339-201ENSMUST00000083659 96 ntBASIC13□□□□□ -0.33
Sp140Q6NSQ5 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Gm44758-201ENSMUST00000206096 2068 ntBASIC13□□□□□ -0.33
Sp140Q6NSQ5 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sp140Q6NSQ5 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Gm15806-201ENSMUST00000120696 955 ntBASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Gm5035-201ENSMUST00000215581 927 ntBASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.99□□□□□ -0.33
Sp140Q6NSQ5 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms