Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ParpbpQ6IRT3 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Gm8213-201ENSMUST00000118191 441 ntBASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Gm27847-201ENSMUST00000183711 107 ntBASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Gm27375-201ENSMUST00000183799 107 ntBASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
ParpbpQ6IRT3 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Gm13123-201ENSMUST00000122173 492 ntBASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Gm10156-201ENSMUST00000122364 462 ntBASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Gm22331-201ENSMUST00000158066 136 ntBASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Gm37922-201ENSMUST00000195596 455 ntBASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ParpbpQ6IRT3 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ParpbpQ6IRT3 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms