Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Gm13813-201ENSMUST00000120998 787 ntBASIC14.17□□□□□ -0.14
Krt39Q6IFX4 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Gm45668-201ENSMUST00000211271 493 ntBASIC14.17□□□□□ -0.14
Krt39Q6IFX4 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Krt39Q6IFX4 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Gm12091-201ENSMUST00000146791 830 ntBASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Gm23984-201ENSMUST00000157139 203 ntBASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Mir7654-201ENSMUST00000185082 70 ntBASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Gm8515-201ENSMUST00000194852 576 ntBASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt39Q6IFX4 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Krt39Q6IFX4 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Krt39Q6IFX4 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Gm15429-201ENSMUST00000151268 798 ntBASIC14.15□□□□□ -0.14
Krt39Q6IFX4 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.15□□□□□ -0.14
Krt39Q6IFX4 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.15□□□□□ -0.14
Krt39Q6IFX4 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms