Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC15□□□□□ -0.01
Scaf8Q6DID3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Scaf8Q6DID3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Scaf8Q6DID3 Gm43056-201ENSMUST00000197865 2791 ntBASIC15□□□□□ -0.01
Scaf8Q6DID3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scaf8Q6DID3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scaf8Q6DID3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Scaf8Q6DID3 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Scaf8Q6DID3 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
Scaf8Q6DID3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15□□□□□ -0.01
Scaf8Q6DID3 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scaf8Q6DID3 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scaf8Q6DID3 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Scaf8Q6DID3 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC15□□□□□ -0.01
Scaf8Q6DID3 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Scaf8Q6DID3 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scaf8Q6DID3 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scaf8Q6DID3 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC15□□□□□ -0.01
Scaf8Q6DID3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC15□□□□□ -0.01
Scaf8Q6DID3 Gm19287-201ENSMUST00000203190 358 ntBASIC15□□□□□ -0.01
Scaf8Q6DID3 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Scaf8Q6DID3 Gm45598-202ENSMUST00000210719 986 ntBASIC15□□□□□ -0.01
Scaf8Q6DID3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Scaf8Q6DID3 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scaf8Q6DID3 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scaf8Q6DID3 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scaf8Q6DID3 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scaf8Q6DID3 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scaf8Q6DID3 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scaf8Q6DID3 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scaf8Q6DID3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scaf8Q6DID3 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC15□□□□□ -0.01
Scaf8Q6DID3 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Scaf8Q6DID3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Scaf8Q6DID3 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Gm27627-201ENSMUST00000183644 150 ntBASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Gm37641-201ENSMUST00000193837 239 ntBASIC14.99□□□□□ -0.01
Scaf8Q6DID3 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Scaf8Q6DID3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Scaf8Q6DID3 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Gm14058-201ENSMUST00000116082 735 ntBASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Gm42919-201ENSMUST00000197753 1284 ntBASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Gm7600-201ENSMUST00000209657 785 ntBASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Gm45359-201ENSMUST00000210635 427 ntBASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Gm39404-201ENSMUST00000216350 313 ntBASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.98□□□□□ -0.01
Scaf8Q6DID3 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC14.98□□□□□ -0.01
Scaf8Q6DID3 AC132901.1-201ENSMUST00000224345 508 ntBASIC14.98□□□□□ -0.01
Scaf8Q6DID3 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scaf8Q6DID3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms