Protein–RNA interactions for Protein: Q60765

Atf3, Cyclic AMP-dependent transcription factor ATF-3, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf3Q60765 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf3Q60765 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atf3Q60765 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atf3Q60765 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Atf3Q60765 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf3Q60765 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf3Q60765 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf3Q60765 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atf3Q60765 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atf3Q60765 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atf3Q60765 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atf3Q60765 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC17.05■□□□□ 0.32
Atf3Q60765 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf3Q60765 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf3Q60765 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC17.05■□□□□ 0.32
Atf3Q60765 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC17.05■□□□□ 0.32
Atf3Q60765 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atf3Q60765 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC17.05■□□□□ 0.32
Atf3Q60765 Mir6998-201ENSMUST00000183343 64 ntBASIC17.05■□□□□ 0.32
Atf3Q60765 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC17.05■□□□□ 0.32
Atf3Q60765 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atf3Q60765 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf3Q60765 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf3Q60765 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Atf3Q60765 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf3Q60765 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf3Q60765 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atf3Q60765 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atf3Q60765 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC17.05■□□□□ 0.32
Atf3Q60765 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf3Q60765 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf3Q60765 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Atf3Q60765 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Atf3Q60765 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf3Q60765 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf3Q60765 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
Atf3Q60765 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf3Q60765 Gm9387-201ENSMUST00000098624 1320 ntBASIC17.04■□□□□ 0.32
Atf3Q60765 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf3Q60765 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Atf3Q60765 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Atf3Q60765 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf3Q60765 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf3Q60765 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf3Q60765 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC17.04■□□□□ 0.32
Atf3Q60765 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Atf3Q60765 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC17.04■□□□□ 0.32
Atf3Q60765 Gm3332-201ENSMUST00000189337 928 ntBASIC17.04■□□□□ 0.32
Atf3Q60765 Gm17831-201ENSMUST00000205579 900 ntBASIC17.04■□□□□ 0.32
Atf3Q60765 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Atf3Q60765 AC154290.1-201ENSMUST00000223786 1240 ntBASIC17.04■□□□□ 0.32
Atf3Q60765 AC156501.1-201ENSMUST00000228219 270 ntBASIC17.04■□□□□ 0.32
Atf3Q60765 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf3Q60765 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC17.04■□□□□ 0.32
Atf3Q60765 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf3Q60765 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf3Q60765 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf3Q60765 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Atf3Q60765 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.04■□□□□ 0.32
Atf3Q60765 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf3Q60765 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Atf3Q60765 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atf3Q60765 AC130671.2-201ENSMUST00000227224 1621 ntBASIC17.03■□□□□ 0.32
Atf3Q60765 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atf3Q60765 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Atf3Q60765 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atf3Q60765 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atf3Q60765 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atf3Q60765 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atf3Q60765 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atf3Q60765 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atf3Q60765 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC17.03■□□□□ 0.32
Atf3Q60765 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC17.03■□□□□ 0.32
Atf3Q60765 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC17.03■□□□□ 0.32
Atf3Q60765 Gm13809-201ENSMUST00000117921 597 ntBASIC17.03■□□□□ 0.32
Atf3Q60765 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC17.03■□□□□ 0.32
Atf3Q60765 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Atf3Q60765 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Atf3Q60765 Gm6771-201ENSMUST00000182716 1001 ntBASIC17.03■□□□□ 0.32
Atf3Q60765 Gm8100-201ENSMUST00000182906 988 ntBASIC17.03■□□□□ 0.32
Atf3Q60765 Gm43184-201ENSMUST00000197247 542 ntBASIC17.03■□□□□ 0.32
Atf3Q60765 Gm3793-201ENSMUST00000204973 672 ntBASIC17.03■□□□□ 0.32
Atf3Q60765 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC17.03■□□□□ 0.32
Atf3Q60765 Gm7395-201ENSMUST00000216059 1045 ntBASIC17.03■□□□□ 0.32
Atf3Q60765 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Atf3Q60765 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Atf3Q60765 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC17.03■□□□□ 0.32
Atf3Q60765 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atf3Q60765 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC17.03■□□□□ 0.32
Atf3Q60765 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
Atf3Q60765 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC17.03■□□□□ 0.32
Atf3Q60765 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Atf3Q60765 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Atf3Q60765 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Atf3Q60765 Gm2420-202ENSMUST00000202224 2249 ntBASIC17.02■□□□□ 0.32
Atf3Q60765 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atf3Q60765 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.02■□□□□ 0.32
Atf3Q60765 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atf3Q60765 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atf3Q60765 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms