Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nr1h4Q60641 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Gm29667-201ENSMUST00000190817 490 ntBASIC12.24□□□□□ -0.45
Nr1h4Q60641 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.24□□□□□ -0.45
Nr1h4Q60641 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Nr1h4Q60641 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Gm15371-201ENSMUST00000117057 784 ntBASIC12.23□□□□□ -0.45
Nr1h4Q60641 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Gm5354-201ENSMUST00000182417 973 ntBASIC12.23□□□□□ -0.45
Nr1h4Q60641 Gm27989-201ENSMUST00000184721 107 ntBASIC12.23□□□□□ -0.45
Nr1h4Q60641 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nr1h4Q60641 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.23□□□□□ -0.45
Nr1h4Q60641 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Nr1h4Q60641 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.23□□□□□ -0.45
Nr1h4Q60641 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nr1h4Q60641 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.22□□□□□ -0.45
Nr1h4Q60641 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.22□□□□□ -0.45
Nr1h4Q60641 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.22□□□□□ -0.45
Nr1h4Q60641 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms