Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cks1brtQ3UNC9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cks1brtQ3UNC9 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cks1brtQ3UNC9 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.18□□□□□ -0.94
Cks1brtQ3UNC9 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cks1brtQ3UNC9 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC9.18□□□□□ -0.94
Cks1brtQ3UNC9 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Cks1brtQ3UNC9 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Cks1brtQ3UNC9 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Cks1brtQ3UNC9 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Cks1brtQ3UNC9 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Gm43365-201ENSMUST00000196522 2106 ntBASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 AC123738.2-201ENSMUST00000223791 1899 ntBASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Gm37368-201ENSMUST00000193173 3212 ntBASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Gm27357-201ENSMUST00000183754 135 ntBASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Gm42670-201ENSMUST00000201816 1292 ntBASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Gm5859-201ENSMUST00000165401 2324 ntBASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Gm5466-201ENSMUST00000119395 1890 ntBASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cks1brtQ3UNC9 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1brtQ3UNC9 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1brtQ3UNC9 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Cks1brtQ3UNC9 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1brtQ3UNC9 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1brtQ3UNC9 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC9.16□□□□□ -0.94
Cks1brtQ3UNC9 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1brtQ3UNC9 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1brtQ3UNC9 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1brtQ3UNC9 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC9.16□□□□□ -0.94
Cks1brtQ3UNC9 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1brtQ3UNC9 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1brtQ3UNC9 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC9.16□□□□□ -0.94
Cks1brtQ3UNC9 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1brtQ3UNC9 Gm43860-201ENSMUST00000201742 2705 ntBASIC9.16□□□□□ -0.94
Cks1brtQ3UNC9 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1brtQ3UNC9 AC211878.3-201ENSMUST00000222629 2018 ntBASIC9.16□□□□□ -0.94
Cks1brtQ3UNC9 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC9.16□□□□□ -0.94
Cks1brtQ3UNC9 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1brtQ3UNC9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
Cks1brtQ3UNC9 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1brtQ3UNC9 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cks1brtQ3UNC9 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms