Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Gm12291-201ENSMUST00000121627 311 ntBASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Gm12138-201ENSMUST00000122180 951 ntBASIC12.09□□□□□ -0.47
Brf2Q3UAW9 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Brf2Q3UAW9 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Gm8805-201ENSMUST00000117848 313 ntBASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Gm12203-201ENSMUST00000118235 598 ntBASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Gm12209-201ENSMUST00000120089 596 ntBASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Gm15806-201ENSMUST00000120696 955 ntBASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Gm13813-201ENSMUST00000120998 787 ntBASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Brf2Q3UAW9 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Brf2Q3UAW9 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms