Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gm17420-201ENSMUST00000164753 153 ntBASIC10.68□□□□□ -0.7
Tff1Q08423 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Tff1Q08423 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
Tff1Q08423 Gm6244-201ENSMUST00000178732 841 ntBASIC10.68□□□□□ -0.7
Tff1Q08423 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Tff1Q08423 Gm5279-201ENSMUST00000199575 745 ntBASIC10.68□□□□□ -0.7
Tff1Q08423 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC10.68□□□□□ -0.7
Tff1Q08423 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.68□□□□□ -0.7
Tff1Q08423 Gm7446-201ENSMUST00000221035 1240 ntBASIC10.68□□□□□ -0.7
Tff1Q08423 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tff1Q08423 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Tff1Q08423 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tff1Q08423 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tff1Q08423 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Tff1Q08423 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.68□□□□□ -0.7
Tff1Q08423 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tff1Q08423 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tff1Q08423 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tff1Q08423 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.68□□□□□ -0.7
Tff1Q08423 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tff1Q08423 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Tff1Q08423 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Tff1Q08423 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tff1Q08423 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tff1Q08423 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Tff1Q08423 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.67□□□□□ -0.7
Tff1Q08423 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Tff1Q08423 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Tff1Q08423 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.67□□□□□ -0.7
Tff1Q08423 Gm8062-201ENSMUST00000139696 444 ntBASIC10.67□□□□□ -0.7
Tff1Q08423 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.67□□□□□ -0.7
Tff1Q08423 Mir7654-201ENSMUST00000185082 70 ntBASIC10.67□□□□□ -0.7
Tff1Q08423 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.67□□□□□ -0.7
Tff1Q08423 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Gm19078-201ENSMUST00000206311 727 ntBASIC10.67□□□□□ -0.7
Tff1Q08423 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Tff1Q08423 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.67□□□□□ -0.7
Tff1Q08423 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Tff1Q08423 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Tff1Q08423 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Tff1Q08423 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
Tff1Q08423 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tff1Q08423 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tff1Q08423 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tff1Q08423 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tff1Q08423 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tff1Q08423 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tff1Q08423 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Tff1Q08423 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tff1Q08423 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tff1Q08423 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tff1Q08423 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tff1Q08423 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tff1Q08423 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tff1Q08423 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tff1Q08423 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tff1Q08423 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tff1Q08423 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Tff1Q08423 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tff1Q08423 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Tff1Q08423 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.66□□□□□ -0.7
Tff1Q08423 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.66□□□□□ -0.7
Tff1Q08423 Gm11524-201ENSMUST00000119349 807 ntBASIC10.66□□□□□ -0.7
Tff1Q08423 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tff1Q08423 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Tff1Q08423 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.66□□□□□ -0.7
Tff1Q08423 Gm27486-201ENSMUST00000184923 80 ntBASIC10.66□□□□□ -0.7
Tff1Q08423 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms