Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col9a1Q05722 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col9a1Q05722 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC12.75□□□□□ -0.37
Col9a1Q05722 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col9a1Q05722 Gm5178-201ENSMUST00000219380 898 ntBASIC12.75□□□□□ -0.37
Col9a1Q05722 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.75□□□□□ -0.37
Col9a1Q05722 AC158388.3-202ENSMUST00000225517 775 ntBASIC12.75□□□□□ -0.37
Col9a1Q05722 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col9a1Q05722 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col9a1Q05722 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col9a1Q05722 Mterf1a-201ENSMUST00000044746 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col9a1Q05722 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col9a1Q05722 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col9a1Q05722 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col9a1Q05722 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Col9a1Q05722 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col9a1Q05722 Gm21811-201ENSMUST00000096485 930 ntBASIC12.75□□□□□ -0.37
Col9a1Q05722 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col9a1Q05722 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.75□□□□□ -0.37
Col9a1Q05722 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Col9a1Q05722 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col9a1Q05722 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Col9a1Q05722 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Col9a1Q05722 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.74□□□□□ -0.37
Col9a1Q05722 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Gm45832-201ENSMUST00000212762 1443 ntBASIC12.74□□□□□ -0.37
Col9a1Q05722 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Gm14862-201ENSMUST00000115553 870 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Gm15161-201ENSMUST00000117340 387 ntBASIC12.74□□□□□ -0.37
Col9a1Q05722 Gm6963-201ENSMUST00000147879 379 ntBASIC12.74□□□□□ -0.37
Col9a1Q05722 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Col9a1Q05722 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Col9a1Q05722 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Col9a1Q05722 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.74□□□□□ -0.37
Col9a1Q05722 Gm18201-201ENSMUST00000174735 875 ntBASIC12.74□□□□□ -0.37
Col9a1Q05722 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Gm8480-201ENSMUST00000190350 698 ntBASIC12.74□□□□□ -0.37
Col9a1Q05722 AY036118-201ENSMUST00000200021 923 ntBASIC12.74□□□□□ -0.37
Col9a1Q05722 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 AC159297.2-201ENSMUST00000219567 1075 ntBASIC12.74□□□□□ -0.37
Col9a1Q05722 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC12.74□□□□□ -0.37
Col9a1Q05722 Gm40879-201ENSMUST00000220759 612 ntBASIC12.74□□□□□ -0.37
Col9a1Q05722 Gm6562-201ENSMUST00000221903 464 ntBASIC12.74□□□□□ -0.37
Col9a1Q05722 AC124569.4-201ENSMUST00000223830 1220 ntBASIC12.74□□□□□ -0.37
Col9a1Q05722 AC154643.1-201ENSMUST00000225643 625 ntBASIC12.74□□□□□ -0.37
Col9a1Q05722 AC133517.2-201ENSMUST00000226820 690 ntBASIC12.74□□□□□ -0.37
Col9a1Q05722 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Col9a1Q05722 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.74□□□□□ -0.37
Col9a1Q05722 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.74□□□□□ -0.37
Col9a1Q05722 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.74□□□□□ -0.37
Col9a1Q05722 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.74□□□□□ -0.37
Col9a1Q05722 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.74□□□□□ -0.37
Col9a1Q05722 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col9a1Q05722 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Col9a1Q05722 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Col9a1Q05722 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Col9a1Q05722 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.73□□□□□ -0.37
Col9a1Q05722 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Col9a1Q05722 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Col9a1Q05722 Gm12501-201ENSMUST00000119163 529 ntBASIC12.73□□□□□ -0.37
Col9a1Q05722 Gm14585-201ENSMUST00000120713 634 ntBASIC12.73□□□□□ -0.37
Col9a1Q05722 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col9a1Q05722 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 105.2 ms