Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
VcpQ01853 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
VcpQ01853 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcpQ01853 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VcpQ01853 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VcpQ01853 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcpQ01853 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcpQ01853 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcpQ01853 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcpQ01853 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcpQ01853 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VcpQ01853 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VcpQ01853 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.72□□□□□ -0.21
VcpQ01853 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
VcpQ01853 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
VcpQ01853 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcpQ01853 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcpQ01853 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.72□□□□□ -0.21
VcpQ01853 Gm22334-201ENSMUST00000158070 133 ntBASIC13.72□□□□□ -0.21
VcpQ01853 Gm25927-201ENSMUST00000175058 117 ntBASIC13.72□□□□□ -0.21
VcpQ01853 Gm38158-201ENSMUST00000194617 339 ntBASIC13.72□□□□□ -0.21
VcpQ01853 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.72□□□□□ -0.21
VcpQ01853 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcpQ01853 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.72□□□□□ -0.21
VcpQ01853 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.72□□□□□ -0.21
VcpQ01853 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VcpQ01853 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcpQ01853 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcpQ01853 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcpQ01853 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VcpQ01853 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VcpQ01853 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcpQ01853 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
VcpQ01853 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
VcpQ01853 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VcpQ01853 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VcpQ01853 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VcpQ01853 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VcpQ01853 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VcpQ01853 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
VcpQ01853 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VcpQ01853 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
VcpQ01853 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
VcpQ01853 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
VcpQ01853 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.71□□□□□ -0.21
VcpQ01853 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VcpQ01853 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
VcpQ01853 Gm5687-201ENSMUST00000118252 640 ntBASIC13.71□□□□□ -0.21
VcpQ01853 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.71□□□□□ -0.21
VcpQ01853 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.71□□□□□ -0.21
VcpQ01853 Gm25261-201ENSMUST00000157416 134 ntBASIC13.71□□□□□ -0.21
VcpQ01853 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VcpQ01853 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VcpQ01853 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VcpQ01853 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
VcpQ01853 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VcpQ01853 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VcpQ01853 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VcpQ01853 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VcpQ01853 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.71□□□□□ -0.21
VcpQ01853 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.71□□□□□ -0.21
VcpQ01853 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VcpQ01853 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
VcpQ01853 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VcpQ01853 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VcpQ01853 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VcpQ01853 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VcpQ01853 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VcpQ01853 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VcpQ01853 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
VcpQ01853 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VcpQ01853 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.71□□□□□ -0.22
VcpQ01853 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.71□□□□□ -0.22
VcpQ01853 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.71□□□□□ -0.22
VcpQ01853 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.71□□□□□ -0.22
VcpQ01853 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
VcpQ01853 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VcpQ01853 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VcpQ01853 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
VcpQ01853 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
VcpQ01853 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VcpQ01853 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VcpQ01853 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VcpQ01853 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.7□□□□□ -0.22
VcpQ01853 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
VcpQ01853 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
VcpQ01853 Gm13369-201ENSMUST00000119442 987 ntBASIC13.7□□□□□ -0.22
VcpQ01853 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VcpQ01853 Mir7032-201ENSMUST00000185154 79 ntBASIC13.7□□□□□ -0.22
VcpQ01853 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
VcpQ01853 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.7□□□□□ -0.22
VcpQ01853 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VcpQ01853 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
VcpQ01853 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
VcpQ01853 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VcpQ01853 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.7□□□□□ -0.22
VcpQ01853 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
VcpQ01853 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.7□□□□□ -0.22
VcpQ01853 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
VcpQ01853 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms