Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Mir7221-201ENSMUST00000184009 72 ntBASIC12.15□□□□□ -0.46
Nkx3-2P97503 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.15□□□□□ -0.46
Nkx3-2P97503 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.15□□□□□ -0.46
Nkx3-2P97503 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Gm19163-201ENSMUST00000223313 780 ntBASIC12.15□□□□□ -0.46
Nkx3-2P97503 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx3-2P97503 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Nkx3-2P97503 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nkx3-2P97503 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Nkx3-2P97503 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Nkx3-2P97503 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.14□□□□□ -0.47
Nkx3-2P97503 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.14□□□□□ -0.47
Nkx3-2P97503 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx3-2P97503 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.14□□□□□ -0.47
Nkx3-2P97503 Gm11591-201ENSMUST00000120063 702 ntBASIC12.14□□□□□ -0.47
Nkx3-2P97503 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Gm37042-201ENSMUST00000193816 581 ntBASIC12.14□□□□□ -0.47
Nkx3-2P97503 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.14□□□□□ -0.47
Nkx3-2P97503 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.14□□□□□ -0.47
Nkx3-2P97503 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.14□□□□□ -0.47
Nkx3-2P97503 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx3-2P97503 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.14□□□□□ -0.47
Nkx3-2P97503 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.14□□□□□ -0.47
Nkx3-2P97503 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.13□□□□□ -0.47
Nkx3-2P97503 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Gm13786-201ENSMUST00000122371 333 ntBASIC12.13□□□□□ -0.47
Nkx3-2P97503 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Gm24548-201ENSMUST00000158650 108 ntBASIC12.13□□□□□ -0.47
Nkx3-2P97503 Gm27501-201ENSMUST00000183599 107 ntBASIC12.13□□□□□ -0.47
Nkx3-2P97503 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.13□□□□□ -0.47
Nkx3-2P97503 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Gm3961-201ENSMUST00000204425 994 ntBASIC12.13□□□□□ -0.47
Nkx3-2P97503 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nkx3-2P97503 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms