Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Npas1P97459 Gm8000-201ENSMUST00000188378 592 ntBASIC10.78□□□□□ -0.68
Npas1P97459 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC10.78□□□□□ -0.68
Npas1P97459 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Npas1P97459 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Npas1P97459 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Npas1P97459 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.78□□□□□ -0.68
Npas1P97459 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Npas1P97459 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Npas1P97459 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Npas1P97459 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Npas1P97459 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Npas1P97459 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Npas1P97459 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Npas1P97459 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Npas1P97459 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Npas1P97459 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Npas1P97459 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Npas1P97459 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Npas1P97459 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Npas1P97459 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Npas1P97459 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Npas1P97459 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Npas1P97459 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Npas1P97459 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Npas1P97459 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Npas1P97459 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Npas1P97459 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Npas1P97459 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Npas1P97459 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC10.77□□□□□ -0.69
Npas1P97459 Gm8410-201ENSMUST00000117225 605 ntBASIC10.77□□□□□ -0.69
Npas1P97459 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC10.77□□□□□ -0.69
Npas1P97459 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Npas1P97459 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC10.77□□□□□ -0.69
Npas1P97459 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC10.77□□□□□ -0.69
Npas1P97459 Gm27533-201ENSMUST00000183800 152 ntBASIC10.77□□□□□ -0.69
Npas1P97459 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Npas1P97459 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Npas1P97459 Gm9229-201ENSMUST00000222777 126 ntBASIC10.77□□□□□ -0.69
Npas1P97459 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Npas1P97459 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.77□□□□□ -0.69
Npas1P97459 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.77□□□□□ -0.69
Npas1P97459 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Npas1P97459 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Npas1P97459 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Npas1P97459 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Npas1P97459 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Npas1P97459 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Npas1P97459 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Npas1P97459 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Npas1P97459 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.76□□□□□ -0.69
Npas1P97459 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Npas1P97459 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Npas1P97459 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Npas1P97459 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Npas1P97459 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Npas1P97459 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Npas1P97459 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Npas1P97459 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Npas1P97459 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Npas1P97459 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.76□□□□□ -0.69
Npas1P97459 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Npas1P97459 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Npas1P97459 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Npas1P97459 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Npas1P97459 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Npas1P97459 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Npas1P97459 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Npas1P97459 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC10.76□□□□□ -0.69
Npas1P97459 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Npas1P97459 Gm15393-201ENSMUST00000120499 219 ntBASIC10.76□□□□□ -0.69
Npas1P97459 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC10.76□□□□□ -0.69
Npas1P97459 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.76□□□□□ -0.69
Npas1P97459 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC10.76□□□□□ -0.69
Npas1P97459 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Npas1P97459 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC10.76□□□□□ -0.69
Npas1P97459 AC225888.1-201ENSMUST00000227184 728 ntBASIC10.76□□□□□ -0.69
Npas1P97459 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Npas1P97459 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Npas1P97459 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Npas1P97459 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Npas1P97459 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Npas1P97459 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Npas1P97459 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Npas1P97459 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.76□□□□□ -0.69
Npas1P97459 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms