Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PrkdcP97313 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Gm12179-201ENSMUST00000118344 1272 ntBASIC8.44□□□□□ -1.06
PrkdcP97313 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC8.44□□□□□ -1.06
PrkdcP97313 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC8.44□□□□□ -1.06
PrkdcP97313 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
PrkdcP97313 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC8.44□□□□□ -1.06
PrkdcP97313 Gm44647-201ENSMUST00000207402 428 ntBASIC8.44□□□□□ -1.06
PrkdcP97313 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
PrkdcP97313 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC8.44□□□□□ -1.06
PrkdcP97313 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Gm14807-201ENSMUST00000116640 983 ntBASIC8.44□□□□□ -1.06
PrkdcP97313 Gm14892-201ENSMUST00000117636 267 ntBASIC8.44□□□□□ -1.06
PrkdcP97313 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC8.44□□□□□ -1.06
PrkdcP97313 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC8.44□□□□□ -1.06
PrkdcP97313 Gm5714-201ENSMUST00000197343 566 ntBASIC8.44□□□□□ -1.06
PrkdcP97313 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
PrkdcP97313 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC8.44□□□□□ -1.06
PrkdcP97313 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Gm43134-201ENSMUST00000199434 1886 ntBASIC8.44□□□□□ -1.06
PrkdcP97313 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC8.44□□□□□ -1.06
PrkdcP97313 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC8.44□□□□□ -1.06
PrkdcP97313 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC8.44□□□□□ -1.06
PrkdcP97313 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
PrkdcP97313 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
PrkdcP97313 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC8.44□□□□□ -1.06
PrkdcP97313 Gm12986-201ENSMUST00000119037 967 ntBASIC8.44□□□□□ -1.06
PrkdcP97313 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC8.44□□□□□ -1.06
PrkdcP97313 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PrkdcP97313 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
PrkdcP97313 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC8.43□□□□□ -1.06
PrkdcP97313 Gm9867-201ENSMUST00000192212 2647 ntBASIC8.43□□□□□ -1.06
PrkdcP97313 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Gm15459-201ENSMUST00000117405 1941 ntBASIC8.43□□□□□ -1.06
PrkdcP97313 Gm8355-201ENSMUST00000177767 1941 ntBASIC8.43□□□□□ -1.06
PrkdcP97313 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Gm7150-201ENSMUST00000122032 981 ntBASIC8.43□□□□□ -1.06
PrkdcP97313 Gm28686-201ENSMUST00000187404 609 ntBASIC8.43□□□□□ -1.06
PrkdcP97313 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC8.43□□□□□ -1.06
PrkdcP97313 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
PrkdcP97313 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
PrkdcP97313 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
PrkdcP97313 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Gm5599-201ENSMUST00000209602 788 ntBASIC8.43□□□□□ -1.06
PrkdcP97313 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC8.43□□□□□ -1.06
PrkdcP97313 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
PrkdcP97313 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Gm11511-201ENSMUST00000118146 540 ntBASIC8.43□□□□□ -1.06
PrkdcP97313 Gm12129-201ENSMUST00000120104 1147 ntBASIC8.43□□□□□ -1.06
PrkdcP97313 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC8.43□□□□□ -1.06
PrkdcP97313 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Gm45094-201ENSMUST00000207013 617 ntBASIC8.43□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms