Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CiitaP79621 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CiitaP79621 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CiitaP79621 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CiitaP79621 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CiitaP79621 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CiitaP79621 Gm11531-201ENSMUST00000117614 555 ntBASIC13.89□□□□□ -0.19
CiitaP79621 Gm12058-201ENSMUST00000118614 437 ntBASIC13.89□□□□□ -0.19
CiitaP79621 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.89□□□□□ -0.19
CiitaP79621 Gm8018-201ENSMUST00000173536 789 ntBASIC13.89□□□□□ -0.19
CiitaP79621 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.89□□□□□ -0.19
CiitaP79621 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CiitaP79621 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.89□□□□□ -0.19
CiitaP79621 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.89□□□□□ -0.19
CiitaP79621 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.89□□□□□ -0.19
CiitaP79621 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.89□□□□□ -0.19
CiitaP79621 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CiitaP79621 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CiitaP79621 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CiitaP79621 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.89□□□□□ -0.19
CiitaP79621 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CiitaP79621 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CiitaP79621 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CiitaP79621 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CiitaP79621 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CiitaP79621 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CiitaP79621 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CiitaP79621 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CiitaP79621 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CiitaP79621 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CiitaP79621 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CiitaP79621 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CiitaP79621 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CiitaP79621 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CiitaP79621 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CiitaP79621 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.88□□□□□ -0.19
CiitaP79621 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CiitaP79621 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CiitaP79621 Gm25214-201ENSMUST00000104573 129 ntBASIC13.88□□□□□ -0.19
CiitaP79621 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CiitaP79621 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.88□□□□□ -0.19
CiitaP79621 Gm14726-201ENSMUST00000120623 896 ntBASIC13.88□□□□□ -0.19
CiitaP79621 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
CiitaP79621 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CiitaP79621 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.88□□□□□ -0.19
CiitaP79621 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CiitaP79621 Gm2546-201ENSMUST00000182630 991 ntBASIC13.88□□□□□ -0.19
CiitaP79621 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.88□□□□□ -0.19
CiitaP79621 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.88□□□□□ -0.19
CiitaP79621 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.88□□□□□ -0.19
CiitaP79621 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CiitaP79621 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CiitaP79621 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CiitaP79621 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CiitaP79621 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.88□□□□□ -0.19
CiitaP79621 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CiitaP79621 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CiitaP79621 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CiitaP79621 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CiitaP79621 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CiitaP79621 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CiitaP79621 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CiitaP79621 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CiitaP79621 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CiitaP79621 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
CiitaP79621 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CiitaP79621 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CiitaP79621 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CiitaP79621 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CiitaP79621 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CiitaP79621 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CiitaP79621 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CiitaP79621 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CiitaP79621 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CiitaP79621 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CiitaP79621 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CiitaP79621 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CiitaP79621 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.87□□□□□ -0.19
CiitaP79621 Gm15703-201ENSMUST00000120250 880 ntBASIC13.87□□□□□ -0.19
CiitaP79621 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CiitaP79621 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CiitaP79621 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CiitaP79621 Gm44405-201ENSMUST00000198952 126 ntBASIC13.87□□□□□ -0.19
CiitaP79621 Gm30285-201ENSMUST00000214614 422 ntBASIC13.87□□□□□ -0.19
CiitaP79621 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.87□□□□□ -0.19
CiitaP79621 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CiitaP79621 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CiitaP79621 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.87□□□□□ -0.19
CiitaP79621 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CiitaP79621 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CiitaP79621 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.87□□□□□ -0.19
CiitaP79621 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CiitaP79621 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CiitaP79621 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.87□□□□□ -0.19
CiitaP79621 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CiitaP79621 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CiitaP79621 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.87□□□□□ -0.19
CiitaP79621 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CiitaP79621 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CiitaP79621 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms