Protein–RNA interactions for Protein: P70700

Polr1b, DNA-directed RNA polymerase I subunit RPA2, mousemouse

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1bP70700 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Polr1bP70700 Gm27306-201ENSMUST00000183970 107 ntBASIC12.34□□□□□ -0.43
Polr1bP70700 Gm45453-201ENSMUST00000211758 853 ntBASIC12.34□□□□□ -0.43
Polr1bP70700 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Polr1bP70700 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.34□□□□□ -0.43
Polr1bP70700 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Polr1bP70700 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Polr1bP70700 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Polr1bP70700 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Polr1bP70700 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
Polr1bP70700 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Polr1bP70700 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Polr1bP70700 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Polr1bP70700 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Polr1bP70700 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Polr1bP70700 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Polr1bP70700 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Polr1bP70700 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Polr1bP70700 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.33□□□□□ -0.43
Polr1bP70700 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Polr1bP70700 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Polr1bP70700 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Polr1bP70700 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.33□□□□□ -0.44
Polr1bP70700 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Polr1bP70700 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Polr1bP70700 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Polr1bP70700 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.33□□□□□ -0.44
Polr1bP70700 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Polr1bP70700 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.33□□□□□ -0.44
Polr1bP70700 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Polr1bP70700 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.33□□□□□ -0.44
Polr1bP70700 Gm5779-201ENSMUST00000218467 910 ntBASIC12.33□□□□□ -0.44
Polr1bP70700 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Polr1bP70700 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Polr1bP70700 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.33□□□□□ -0.44
Polr1bP70700 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.33□□□□□ -0.44
Polr1bP70700 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Polr1bP70700 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.33□□□□□ -0.44
Polr1bP70700 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Polr1bP70700 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Polr1bP70700 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Polr1bP70700 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Polr1bP70700 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Polr1bP70700 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Polr1bP70700 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Polr1bP70700 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Polr1bP70700 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Polr1bP70700 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Polr1bP70700 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Polr1bP70700 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Polr1bP70700 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Polr1bP70700 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Polr1bP70700 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Polr1bP70700 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.32□□□□□ -0.44
Polr1bP70700 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Polr1bP70700 Gm13453-201ENSMUST00000118708 357 ntBASIC12.32□□□□□ -0.44
Polr1bP70700 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.32□□□□□ -0.44
Polr1bP70700 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.32□□□□□ -0.44
Polr1bP70700 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Polr1bP70700 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.32□□□□□ -0.44
Polr1bP70700 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Polr1bP70700 Gm25144-201ENSMUST00000179561 110 ntBASIC12.32□□□□□ -0.44
Polr1bP70700 Gm25352-201ENSMUST00000179815 110 ntBASIC12.32□□□□□ -0.44
Polr1bP70700 Gm27631-201ENSMUST00000184163 466 ntBASIC12.32□□□□□ -0.44
Polr1bP70700 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.32□□□□□ -0.44
Polr1bP70700 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Polr1bP70700 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Polr1bP70700 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Polr1bP70700 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Polr1bP70700 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.32□□□□□ -0.44
Polr1bP70700 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.32□□□□□ -0.44
Polr1bP70700 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Polr1bP70700 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Polr1bP70700 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms