Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shox2P70390 Gm17271-201ENSMUST00000165535 355 ntBASIC12.65□□□□□ -0.38
Shox2P70390 Mir3113-201ENSMUST00000175478 76 ntBASIC12.65□□□□□ -0.38
Shox2P70390 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Shox2P70390 Gm29608-201ENSMUST00000190444 463 ntBASIC12.65□□□□□ -0.38
Shox2P70390 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.65□□□□□ -0.38
Shox2P70390 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Shox2P70390 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Shox2P70390 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.65□□□□□ -0.38
Shox2P70390 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.65□□□□□ -0.38
Shox2P70390 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Shox2P70390 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.65□□□□□ -0.38
Shox2P70390 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.65□□□□□ -0.38
Shox2P70390 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Shox2P70390 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shox2P70390 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shox2P70390 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.65□□□□□ -0.38
Shox2P70390 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shox2P70390 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.65□□□□□ -0.38
Shox2P70390 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Shox2P70390 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Shox2P70390 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.39
Shox2P70390 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Shox2P70390 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shox2P70390 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.64□□□□□ -0.39
Shox2P70390 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shox2P70390 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.64□□□□□ -0.39
Shox2P70390 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shox2P70390 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shox2P70390 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shox2P70390 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shox2P70390 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shox2P70390 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.64□□□□□ -0.39
Shox2P70390 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.64□□□□□ -0.39
Shox2P70390 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shox2P70390 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shox2P70390 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.64□□□□□ -0.39
Shox2P70390 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Shox2P70390 Gm28659-201ENSMUST00000188013 759 ntBASIC12.64□□□□□ -0.39
Shox2P70390 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.64□□□□□ -0.39
Shox2P70390 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Shox2P70390 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.64□□□□□ -0.39
Shox2P70390 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shox2P70390 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shox2P70390 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.64□□□□□ -0.39
Shox2P70390 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shox2P70390 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shox2P70390 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shox2P70390 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shox2P70390 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Shox2P70390 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Shox2P70390 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shox2P70390 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shox2P70390 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Shox2P70390 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shox2P70390 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Shox2P70390 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Shox2P70390 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shox2P70390 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shox2P70390 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Shox2P70390 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.63□□□□□ -0.39
Shox2P70390 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shox2P70390 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shox2P70390 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shox2P70390 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shox2P70390 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Shox2P70390 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Shox2P70390 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Shox2P70390 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shox2P70390 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shox2P70390 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.63□□□□□ -0.39
Shox2P70390 Gm28630-201ENSMUST00000187806 498 ntBASIC12.63□□□□□ -0.39
Shox2P70390 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Shox2P70390 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.63□□□□□ -0.39
Shox2P70390 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Shox2P70390 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.63□□□□□ -0.39
Shox2P70390 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shox2P70390 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Shox2P70390 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shox2P70390 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shox2P70390 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shox2P70390 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Shox2P70390 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shox2P70390 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shox2P70390 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shox2P70390 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Shox2P70390 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shox2P70390 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shox2P70390 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shox2P70390 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shox2P70390 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shox2P70390 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shox2P70390 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.62□□□□□ -0.39
Shox2P70390 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Shox2P70390 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shox2P70390 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.62□□□□□ -0.39
Shox2P70390 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Shox2P70390 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.62□□□□□ -0.39
Shox2P70390 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.62□□□□□ -0.39
Shox2P70390 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms