Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Msx3P70354 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Msx3P70354 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Msx3P70354 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Msx3P70354 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.18□□□□□ -0.3
Msx3P70354 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.18□□□□□ -0.3
Msx3P70354 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Msx3P70354 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.18□□□□□ -0.3
Msx3P70354 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.18□□□□□ -0.3
Msx3P70354 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Msx3P70354 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Gm23363-201ENSMUST00000175024 79 ntBASIC13.18□□□□□ -0.3
Msx3P70354 Gm27486-201ENSMUST00000184923 80 ntBASIC13.18□□□□□ -0.3
Msx3P70354 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Gm9794-201ENSMUST00000202370 423 ntBASIC13.18□□□□□ -0.3
Msx3P70354 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.18□□□□□ -0.3
Msx3P70354 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.18□□□□□ -0.3
Msx3P70354 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Msx3P70354 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Msx3P70354 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.18□□□□□ -0.3
Msx3P70354 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.18□□□□□ -0.3
Msx3P70354 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Msx3P70354 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Msx3P70354 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Msx3P70354 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.18□□□□□ -0.3
Msx3P70354 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msx3P70354 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx3P70354 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx3P70354 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx3P70354 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx3P70354 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Msx3P70354 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx3P70354 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Msx3P70354 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.17□□□□□ -0.3
Msx3P70354 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.17□□□□□ -0.3
Msx3P70354 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.17□□□□□ -0.3
Msx3P70354 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx3P70354 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Msx3P70354 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.17□□□□□ -0.3
Msx3P70354 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Msx3P70354 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.17□□□□□ -0.3
Msx3P70354 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.17□□□□□ -0.3
Msx3P70354 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.17□□□□□ -0.3
Msx3P70354 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx3P70354 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx3P70354 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx3P70354 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Msx3P70354 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Msx3P70354 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx3P70354 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx3P70354 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.17□□□□□ -0.3
Msx3P70354 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx3P70354 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx3P70354 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Msx3P70354 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx3P70354 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.17□□□□□ -0.3
Msx3P70354 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Msx3P70354 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Msx3P70354 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx3P70354 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msx3P70354 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx3P70354 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx3P70354 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx3P70354 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Msx3P70354 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.16□□□□□ -0.3
Msx3P70354 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msx3P70354 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms