Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Pdlim4P70271 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Pdlim4P70271 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.72□□□□□ -0.69
Pdlim4P70271 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pdlim4P70271 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.71□□□□□ -0.69
Pdlim4P70271 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pdlim4P70271 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pdlim4P70271 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pdlim4P70271 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pdlim4P70271 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Pdlim4P70271 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pdlim4P70271 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pdlim4P70271 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pdlim4P70271 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pdlim4P70271 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pdlim4P70271 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Pdlim4P70271 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pdlim4P70271 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.71□□□□□ -0.69
Pdlim4P70271 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Pdlim4P70271 Gm13369-201ENSMUST00000119442 987 ntBASIC10.71□□□□□ -0.69
Pdlim4P70271 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pdlim4P70271 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.71□□□□□ -0.69
Pdlim4P70271 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Pdlim4P70271 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.71□□□□□ -0.69
Pdlim4P70271 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pdlim4P70271 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Pdlim4P70271 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pdlim4P70271 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pdlim4P70271 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.71□□□□□ -0.69
Pdlim4P70271 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pdlim4P70271 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC10.71□□□□□ -0.69
Pdlim4P70271 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.71□□□□□ -0.69
Pdlim4P70271 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.71□□□□□ -0.69
Pdlim4P70271 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.71□□□□□ -0.69
Pdlim4P70271 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.71□□□□□ -0.69
Pdlim4P70271 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pdlim4P70271 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pdlim4P70271 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Pdlim4P70271 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
Pdlim4P70271 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pdlim4P70271 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pdlim4P70271 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Pdlim4P70271 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pdlim4P70271 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pdlim4P70271 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Pdlim4P70271 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Pdlim4P70271 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Pdlim4P70271 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Pdlim4P70271 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim4P70271 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim4P70271 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim4P70271 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.7□□□□□ -0.7
Pdlim4P70271 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim4P70271 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim4P70271 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Pdlim4P70271 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim4P70271 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim4P70271 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim4P70271 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.7□□□□□ -0.7
Pdlim4P70271 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.7□□□□□ -0.7
Pdlim4P70271 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.7□□□□□ -0.7
Pdlim4P70271 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim4P70271 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim4P70271 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.7□□□□□ -0.7
Pdlim4P70271 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pdlim4P70271 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.7□□□□□ -0.7
Pdlim4P70271 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim4P70271 Gm12390-201ENSMUST00000117897 397 ntBASIC10.7□□□□□ -0.7
Pdlim4P70271 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.7□□□□□ -0.7
Pdlim4P70271 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim4P70271 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.7□□□□□ -0.7
Pdlim4P70271 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim4P70271 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Pdlim4P70271 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.7□□□□□ -0.7
Pdlim4P70271 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.7□□□□□ -0.7
Pdlim4P70271 Gm29705-201ENSMUST00000212598 474 ntBASIC10.7□□□□□ -0.7
Pdlim4P70271 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim4P70271 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.7□□□□□ -0.7
Pdlim4P70271 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim4P70271 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim4P70271 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Pdlim4P70271 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Pdlim4P70271 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Pdlim4P70271 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim4P70271 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim4P70271 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim4P70271 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim4P70271 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim4P70271 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Pdlim4P70271 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms