Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.28□□□□□ -0.6
Lsm6P62313 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.28□□□□□ -0.6
Lsm6P62313 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Lsm6P62313 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Lsm6P62313 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.28□□□□□ -0.6
Lsm6P62313 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.28□□□□□ -0.6
Lsm6P62313 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.28□□□□□ -0.6
Lsm6P62313 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.28□□□□□ -0.6
Lsm6P62313 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Lsm6P62313 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lsm6P62313 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Lsm6P62313 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm6P62313 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm6P62313 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.27□□□□□ -0.6
Lsm6P62313 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Lsm6P62313 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.27□□□□□ -0.6
Lsm6P62313 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm6P62313 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm6P62313 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Lsm6P62313 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm6P62313 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm6P62313 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Lsm6P62313 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lsm6P62313 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm6P62313 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm6P62313 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Lsm6P62313 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Lsm6P62313 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm6P62313 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm6P62313 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.27□□□□□ -0.61
Lsm6P62313 Gm16479-201ENSMUST00000121706 932 ntBASIC11.27□□□□□ -0.61
Lsm6P62313 Gm26185-201ENSMUST00000157692 266 ntBASIC11.27□□□□□ -0.61
Lsm6P62313 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.27□□□□□ -0.61
Lsm6P62313 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm6P62313 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.27□□□□□ -0.61
Lsm6P62313 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm6P62313 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm6P62313 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Lsm6P62313 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm6P62313 Mir339-201ENSMUST00000083659 96 ntBASIC11.27□□□□□ -0.61
Lsm6P62313 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm6P62313 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Lsm6P62313 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm6P62313 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm6P62313 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.27□□□□□ -0.61
Lsm6P62313 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.27□□□□□ -0.61
Lsm6P62313 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Lsm6P62313 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm6P62313 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm6P62313 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lsm6P62313 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Lsm6P62313 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.27□□□□□ -0.61
Lsm6P62313 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm6P62313 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm6P62313 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm6P62313 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Lsm6P62313 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm6P62313 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Lsm6P62313 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.26□□□□□ -0.61
Lsm6P62313 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm6P62313 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.26□□□□□ -0.61
Lsm6P62313 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm6P62313 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.26□□□□□ -0.61
Lsm6P62313 Gm11478-201ENSMUST00000117851 599 ntBASIC11.26□□□□□ -0.61
Lsm6P62313 Gm13369-201ENSMUST00000119442 987 ntBASIC11.26□□□□□ -0.61
Lsm6P62313 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm6P62313 Gm22331-201ENSMUST00000158066 136 ntBASIC11.26□□□□□ -0.61
Lsm6P62313 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.26□□□□□ -0.61
Lsm6P62313 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm6P62313 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm6P62313 Gm27847-201ENSMUST00000183711 107 ntBASIC11.26□□□□□ -0.61
Lsm6P62313 Gm27375-201ENSMUST00000183799 107 ntBASIC11.26□□□□□ -0.61
Lsm6P62313 Gm37042-201ENSMUST00000193816 581 ntBASIC11.26□□□□□ -0.61
Lsm6P62313 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.26□□□□□ -0.61
Lsm6P62313 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Lsm6P62313 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
Lsm6P62313 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.26□□□□□ -0.61
Lsm6P62313 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.26□□□□□ -0.61
Lsm6P62313 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm6P62313 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm6P62313 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Lsm6P62313 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.26□□□□□ -0.61
Lsm6P62313 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Lsm6P62313 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.26□□□□□ -0.61
Lsm6P62313 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm6P62313 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms