Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.66□□□□□ -0.54
Lsm3P62311 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Lsm3P62311 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Lsm3P62311 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Lsm3P62311 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.66□□□□□ -0.54
Lsm3P62311 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Lsm3P62311 Gm15460-201ENSMUST00000118147 391 ntBASIC11.66□□□□□ -0.54
Lsm3P62311 Gm11025-201ENSMUST00000140773 466 ntBASIC11.66□□□□□ -0.54
Lsm3P62311 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.66□□□□□ -0.54
Lsm3P62311 Mir7071-201ENSMUST00000184847 69 ntBASIC11.66□□□□□ -0.54
Lsm3P62311 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.66□□□□□ -0.54
Lsm3P62311 Gm18057-201ENSMUST00000208220 503 ntBASIC11.66□□□□□ -0.54
Lsm3P62311 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.66□□□□□ -0.54
Lsm3P62311 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.66□□□□□ -0.54
Lsm3P62311 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.66□□□□□ -0.54
Lsm3P62311 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.66□□□□□ -0.54
Lsm3P62311 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Lsm3P62311 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.66□□□□□ -0.54
Lsm3P62311 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Lsm3P62311 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Lsm3P62311 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Lsm3P62311 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lsm3P62311 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.65□□□□□ -0.54
Lsm3P62311 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.65□□□□□ -0.54
Lsm3P62311 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Lsm3P62311 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.65□□□□□ -0.54
Lsm3P62311 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.65□□□□□ -0.54
Lsm3P62311 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Lsm3P62311 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.65□□□□□ -0.54
Lsm3P62311 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.65□□□□□ -0.54
Lsm3P62311 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.65□□□□□ -0.54
Lsm3P62311 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Lsm3P62311 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Lsm3P62311 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Lsm3P62311 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Lsm3P62311 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Lsm3P62311 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Lsm3P62311 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Lsm3P62311 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Lsm3P62311 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms