Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.12□□□□□ -0.47
Nup43P59235 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.12□□□□□ -0.47
Nup43P59235 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nup43P59235 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.12□□□□□ -0.47
Nup43P59235 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nup43P59235 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nup43P59235 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Nup43P59235 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nup43P59235 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Nup43P59235 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Nup43P59235 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nup43P59235 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.11□□□□□ -0.47
Nup43P59235 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.11□□□□□ -0.47
Nup43P59235 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.11□□□□□ -0.47
Nup43P59235 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Gm14921-201ENSMUST00000118643 908 ntBASIC12.11□□□□□ -0.47
Nup43P59235 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Nup43P59235 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.11□□□□□ -0.47
Nup43P59235 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.11□□□□□ -0.47
Nup43P59235 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.11□□□□□ -0.47
Nup43P59235 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.11□□□□□ -0.47
Nup43P59235 Gm32025-201ENSMUST00000217960 307 ntBASIC12.11□□□□□ -0.47
Nup43P59235 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.11□□□□□ -0.47
Nup43P59235 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.11□□□□□ -0.47
Nup43P59235 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.11□□□□□ -0.47
Nup43P59235 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.11□□□□□ -0.47
Nup43P59235 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nup43P59235 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nup43P59235 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup43P59235 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup43P59235 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nup43P59235 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nup43P59235 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup43P59235 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup43P59235 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup43P59235 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup43P59235 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Nup43P59235 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup43P59235 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nup43P59235 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Nup43P59235 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nup43P59235 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup43P59235 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nup43P59235 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.1□□□□□ -0.47
Nup43P59235 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup43P59235 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nup43P59235 Gm25927-201ENSMUST00000175058 117 ntBASIC12.1□□□□□ -0.47
Nup43P59235 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Nup43P59235 Mir7085-201ENSMUST00000184353 66 ntBASIC12.1□□□□□ -0.47
Nup43P59235 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.1□□□□□ -0.47
Nup43P59235 Gm5370-201ENSMUST00000187187 574 ntBASIC12.1□□□□□ -0.47
Nup43P59235 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.1□□□□□ -0.47
Nup43P59235 AY702102-202ENSMUST00000194651 1173 ntBASIC12.1□□□□□ -0.47
Nup43P59235 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms