Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh11P55288 Gm15371-201ENSMUST00000117057 784 ntBASIC11.71□□□□□ -0.53
Cdh11P55288 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.71□□□□□ -0.53
Cdh11P55288 Mir1894-201ENSMUST00000122802 81 ntBASIC11.71□□□□□ -0.53
Cdh11P55288 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.71□□□□□ -0.53
Cdh11P55288 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.71□□□□□ -0.53
Cdh11P55288 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Cdh11P55288 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh11P55288 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.71□□□□□ -0.53
Cdh11P55288 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh11P55288 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cdh11P55288 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh11P55288 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh11P55288 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh11P55288 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh11P55288 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.71□□□□□ -0.54
Cdh11P55288 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.71□□□□□ -0.54
Cdh11P55288 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh11P55288 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh11P55288 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh11P55288 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh11P55288 Matn2-203ENSMUST00000226766 3252 ntBASIC11.71□□□□□ -0.54
Cdh11P55288 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh11P55288 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh11P55288 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh11P55288 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh11P55288 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh11P55288 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh11P55288 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh11P55288 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.7□□□□□ -0.54
Cdh11P55288 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Cdh11P55288 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.7□□□□□ -0.54
Cdh11P55288 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.7□□□□□ -0.54
Cdh11P55288 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.7□□□□□ -0.54
Cdh11P55288 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cdh11P55288 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.7□□□□□ -0.54
Cdh11P55288 Gm2495-201ENSMUST00000191160 466 ntBASIC11.7□□□□□ -0.54
Cdh11P55288 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Cdh11P55288 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.7□□□□□ -0.54
Cdh11P55288 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cdh11P55288 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh11P55288 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Cdh11P55288 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Cdh11P55288 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh11P55288 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Cdh11P55288 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.69□□□□□ -0.54
Cdh11P55288 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cdh11P55288 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh11P55288 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh11P55288 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh11P55288 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.69□□□□□ -0.54
Cdh11P55288 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh11P55288 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh11P55288 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.69□□□□□ -0.54
Cdh11P55288 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh11P55288 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh11P55288 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Cdh11P55288 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cdh11P55288 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh11P55288 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh11P55288 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh11P55288 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh11P55288 Gm12928-201ENSMUST00000117115 573 ntBASIC11.69□□□□□ -0.54
Cdh11P55288 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.69□□□□□ -0.54
Cdh11P55288 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.69□□□□□ -0.54
Cdh11P55288 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdh11P55288 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.69□□□□□ -0.54
Cdh11P55288 Gm27486-201ENSMUST00000184923 80 ntBASIC11.69□□□□□ -0.54
Cdh11P55288 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms