Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdkn2bP55271 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdkn2bP55271 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cdkn2bP55271 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Cdkn2bP55271 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdkn2bP55271 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cdkn2bP55271 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Cdkn2bP55271 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdkn2bP55271 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
Cdkn2bP55271 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdkn2bP55271 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Cdkn2bP55271 Mir7023-201ENSMUST00000185093 64 ntBASIC12.27□□□□□ -0.45
Cdkn2bP55271 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdkn2bP55271 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.27□□□□□ -0.45
Cdkn2bP55271 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdkn2bP55271 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cdkn2bP55271 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdkn2bP55271 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cdkn2bP55271 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cdkn2bP55271 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdkn2bP55271 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdkn2bP55271 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cdkn2bP55271 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdkn2bP55271 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdkn2bP55271 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cdkn2bP55271 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Cdkn2bP55271 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cdkn2bP55271 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cdkn2bP55271 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.26□□□□□ -0.45
Cdkn2bP55271 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Gm10576-201ENSMUST00000191927 825 ntBASIC12.26□□□□□ -0.45
Cdkn2bP55271 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.26□□□□□ -0.45
Cdkn2bP55271 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.26□□□□□ -0.45
Cdkn2bP55271 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdkn2bP55271 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.26□□□□□ -0.45
Cdkn2bP55271 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkn2bP55271 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.25□□□□□ -0.45
Cdkn2bP55271 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.25□□□□□ -0.45
Cdkn2bP55271 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdkn2bP55271 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkn2bP55271 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.25□□□□□ -0.45
Cdkn2bP55271 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdkn2bP55271 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms