Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Srp9P49962 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Srp9P49962 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Srp9P49962 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Srp9P49962 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Srp9P49962 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Srp9P49962 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Srp9P49962 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Srp9P49962 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Srp9P49962 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Srp9P49962 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.92□□□□□ -0.66
Srp9P49962 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Srp9P49962 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.91□□□□□ -0.66
Srp9P49962 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.91□□□□□ -0.66
Srp9P49962 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.91□□□□□ -0.66
Srp9P49962 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 Gm25927-201ENSMUST00000175058 117 ntBASIC10.91□□□□□ -0.66
Srp9P49962 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Srp9P49962 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Srp9P49962 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC10.91□□□□□ -0.66
Srp9P49962 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Srp9P49962 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Srp9P49962 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Srp9P49962 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.91□□□□□ -0.66
Srp9P49962 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.91□□□□□ -0.66
Srp9P49962 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Srp9P49962 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Srp9P49962 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Srp9P49962 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Srp9P49962 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Srp9P49962 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Srp9P49962 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Srp9P49962 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Srp9P49962 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Srp9P49962 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Srp9P49962 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Srp9P49962 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Srp9P49962 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Srp9P49962 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Srp9P49962 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Srp9P49962 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.9□□□□□ -0.66
Srp9P49962 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Srp9P49962 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Srp9P49962 Gm12537-201ENSMUST00000119266 1002 ntBASIC10.9□□□□□ -0.66
Srp9P49962 Gm12070-201ENSMUST00000119551 1002 ntBASIC10.9□□□□□ -0.66
Srp9P49962 Gm12671-201ENSMUST00000119978 1002 ntBASIC10.9□□□□□ -0.66
Srp9P49962 Gm13292-201ENSMUST00000120014 1000 ntBASIC10.9□□□□□ -0.66
Srp9P49962 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.9□□□□□ -0.66
Srp9P49962 Gm12403-201ENSMUST00000121384 959 ntBASIC10.9□□□□□ -0.66
Srp9P49962 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Srp9P49962 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.9□□□□□ -0.66
Srp9P49962 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.9□□□□□ -0.66
Srp9P49962 Gm10359-201ENSMUST00000180167 1002 ntBASIC10.9□□□□□ -0.66
Srp9P49962 Gm12033-201ENSMUST00000180654 1002 ntBASIC10.9□□□□□ -0.66
Srp9P49962 Gm5559-201ENSMUST00000180755 1002 ntBASIC10.9□□□□□ -0.66
Srp9P49962 Gm4335-201ENSMUST00000182581 1004 ntBASIC10.9□□□□□ -0.66
Srp9P49962 Gm28631-201ENSMUST00000190740 334 ntBASIC10.9□□□□□ -0.66
Srp9P49962 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Srp9P49962 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Srp9P49962 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Srp9P49962 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Srp9P49962 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Srp9P49962 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Srp9P49962 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Srp9P49962 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.9□□□□□ -0.66
Srp9P49962 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Srp9P49962 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.9□□□□□ -0.66
Srp9P49962 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.9□□□□□ -0.66
Srp9P49962 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Srp9P49962 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Srp9P49962 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Srp9P49962 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Srp9P49962 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Srp9P49962 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Srp9P49962 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Srp9P49962 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.9□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms