Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HttP42859 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
HttP42859 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HttP42859 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HttP42859 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HttP42859 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HttP42859 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.23□□□□□ -0.29
HttP42859 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HttP42859 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.23□□□□□ -0.29
HttP42859 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.23□□□□□ -0.29
HttP42859 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HttP42859 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HttP42859 Gm7722-201ENSMUST00000120646 741 ntBASIC13.23□□□□□ -0.29
HttP42859 Gm16305-201ENSMUST00000140747 556 ntBASIC13.23□□□□□ -0.29
HttP42859 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC13.23□□□□□ -0.29
HttP42859 Gm12407-201ENSMUST00000180219 324 ntBASIC13.23□□□□□ -0.29
HttP42859 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC13.23□□□□□ -0.29
HttP42859 Gm44647-201ENSMUST00000207402 428 ntBASIC13.23□□□□□ -0.29
HttP42859 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HttP42859 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HttP42859 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HttP42859 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HttP42859 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HttP42859 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HttP42859 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
HttP42859 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HttP42859 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HttP42859 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HttP42859 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HttP42859 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HttP42859 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.22□□□□□ -0.29
HttP42859 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC13.22□□□□□ -0.29
HttP42859 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HttP42859 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
HttP42859 Gm3283-201ENSMUST00000199319 1350 ntBASIC13.22□□□□□ -0.29
HttP42859 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.22□□□□□ -0.29
HttP42859 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HttP42859 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HttP42859 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.22□□□□□ -0.29
HttP42859 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HttP42859 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
HttP42859 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HttP42859 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HttP42859 Gm5513-201ENSMUST00000072982 1218 ntBASIC13.22□□□□□ -0.29
HttP42859 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
HttP42859 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HttP42859 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.22□□□□□ -0.29
HttP42859 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HttP42859 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
HttP42859 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HttP42859 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
HttP42859 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.22□□□□□ -0.29
HttP42859 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HttP42859 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HttP42859 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.22□□□□□ -0.29
HttP42859 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC13.22□□□□□ -0.29
HttP42859 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HttP42859 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HttP42859 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HttP42859 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.21□□□□□ -0.29
HttP42859 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HttP42859 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HttP42859 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HttP42859 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.21□□□□□ -0.29
HttP42859 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HttP42859 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.21□□□□□ -0.29
HttP42859 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HttP42859 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.21□□□□□ -0.29
HttP42859 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HttP42859 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HttP42859 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HttP42859 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
HttP42859 Gm23272-201ENSMUST00000104053 129 ntBASIC13.21□□□□□ -0.29
HttP42859 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13.21□□□□□ -0.29
HttP42859 Gm25226-201ENSMUST00000158198 123 ntBASIC13.21□□□□□ -0.29
HttP42859 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.21□□□□□ -0.29
HttP42859 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HttP42859 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HttP42859 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC13.21□□□□□ -0.29
HttP42859 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
HttP42859 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
HttP42859 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
HttP42859 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.21□□□□□ -0.29
HttP42859 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
HttP42859 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HttP42859 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
HttP42859 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.21□□□□□ -0.3
HttP42859 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HttP42859 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HttP42859 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HttP42859 Gm12419-201ENSMUST00000116649 636 ntBASIC13.21□□□□□ -0.3
HttP42859 Gm6322-201ENSMUST00000118789 1004 ntBASIC13.21□□□□□ -0.3
HttP42859 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.21□□□□□ -0.3
HttP42859 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC13.21□□□□□ -0.3
HttP42859 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HttP42859 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC13.21□□□□□ -0.3
HttP42859 Gm45481-201ENSMUST00000209717 877 ntBASIC13.21□□□□□ -0.3
HttP42859 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.21□□□□□ -0.3
HttP42859 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HttP42859 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms