Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.07□□□□□ -0.48
Sox6P40645 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.07□□□□□ -0.48
Sox6P40645 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Sox6P40645 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sox6P40645 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sox6P40645 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Sox6P40645 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sox6P40645 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sox6P40645 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.06□□□□□ -0.48
Sox6P40645 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.06□□□□□ -0.48
Sox6P40645 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Sox6P40645 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.06□□□□□ -0.48
Sox6P40645 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sox6P40645 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.06□□□□□ -0.48
Sox6P40645 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.06□□□□□ -0.48
Sox6P40645 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sox6P40645 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
Sox6P40645 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Sox6P40645 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sox6P40645 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.06□□□□□ -0.48
Sox6P40645 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.06□□□□□ -0.48
Sox6P40645 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.06□□□□□ -0.48
Sox6P40645 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox6P40645 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.05□□□□□ -0.48
Sox6P40645 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox6P40645 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.05□□□□□ -0.48
Sox6P40645 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sox6P40645 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox6P40645 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox6P40645 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Sox6P40645 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox6P40645 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.05□□□□□ -0.48
Sox6P40645 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox6P40645 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Sox6P40645 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.05□□□□□ -0.48
Sox6P40645 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.05□□□□□ -0.48
Sox6P40645 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox6P40645 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox6P40645 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox6P40645 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox6P40645 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox6P40645 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Sox6P40645 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox6P40645 Gm6745-201ENSMUST00000199216 526 ntBASIC12.05□□□□□ -0.48
Sox6P40645 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox6P40645 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.05□□□□□ -0.48
Sox6P40645 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox6P40645 Gm6180-201ENSMUST00000065243 498 ntBASIC12.05□□□□□ -0.48
Sox6P40645 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox6P40645 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.05□□□□□ -0.48
Sox6P40645 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox6P40645 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Sox6P40645 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox6P40645 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.05□□□□□ -0.48
Sox6P40645 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox6P40645 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox6P40645 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox6P40645 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox6P40645 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox6P40645 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox6P40645 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox6P40645 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox6P40645 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox6P40645 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox6P40645 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms