Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Slc6a1P31648 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc6a1P31648 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.05□□□□□ -0.64
Slc6a1P31648 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Slc6a1P31648 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Slc6a1P31648 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Slc6a1P31648 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.05□□□□□ -0.64
Slc6a1P31648 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Slc6a1P31648 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Slc6a1P31648 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Slc6a1P31648 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Slc6a1P31648 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Slc6a1P31648 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Slc6a1P31648 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Slc6a1P31648 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.05□□□□□ -0.64
Slc6a1P31648 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Slc6a1P31648 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Slc6a1P31648 Gm27390-201ENSMUST00000184516 176 ntBASIC11.05□□□□□ -0.64
Slc6a1P31648 Gm28631-201ENSMUST00000190740 334 ntBASIC11.05□□□□□ -0.64
Slc6a1P31648 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.05□□□□□ -0.64
Slc6a1P31648 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.05□□□□□ -0.64
Slc6a1P31648 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.05□□□□□ -0.64
Slc6a1P31648 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Slc6a1P31648 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Slc6a1P31648 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Slc6a1P31648 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Slc6a1P31648 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Slc6a1P31648 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Slc6a1P31648 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Slc6a1P31648 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Slc6a1P31648 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.05□□□□□ -0.64
Slc6a1P31648 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Slc6a1P31648 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Slc6a1P31648 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Slc6a1P31648 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Slc6a1P31648 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Slc6a1P31648 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Slc6a1P31648 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Slc6a1P31648 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Slc6a1P31648 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Slc6a1P31648 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Slc6a1P31648 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.04□□□□□ -0.64
Slc6a1P31648 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Slc6a1P31648 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Slc6a1P31648 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.04□□□□□ -0.64
Slc6a1P31648 Gm14719-201ENSMUST00000121891 340 ntBASIC11.04□□□□□ -0.64
Slc6a1P31648 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.04□□□□□ -0.64
Slc6a1P31648 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.04□□□□□ -0.64
Slc6a1P31648 Gm27631-201ENSMUST00000184163 466 ntBASIC11.04□□□□□ -0.64
Slc6a1P31648 Gm35960-201ENSMUST00000202712 767 ntBASIC11.04□□□□□ -0.64
Slc6a1P31648 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.04□□□□□ -0.64
Slc6a1P31648 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.04□□□□□ -0.64
Slc6a1P31648 Gm7775-201ENSMUST00000218871 853 ntBASIC11.04□□□□□ -0.64
Slc6a1P31648 Gm9229-201ENSMUST00000222777 126 ntBASIC11.04□□□□□ -0.64
Slc6a1P31648 Dupd1-202ENSMUST00000224735 548 ntBASIC11.04□□□□□ -0.64
Slc6a1P31648 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.04□□□□□ -0.64
Slc6a1P31648 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.04□□□□□ -0.64
Slc6a1P31648 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Slc6a1P31648 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.04□□□□□ -0.64
Slc6a1P31648 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.04□□□□□ -0.64
Slc6a1P31648 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.04□□□□□ -0.64
Slc6a1P31648 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Slc6a1P31648 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Slc6a1P31648 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Slc6a1P31648 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc6a1P31648 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms