Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.19□□□□□ -0.3
Nfkb1P25799 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Gm11964-201ENSMUST00000120982 444 ntBASIC13.19□□□□□ -0.3
Nfkb1P25799 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Nfkb1P25799 Gm23363-201ENSMUST00000175024 79 ntBASIC13.19□□□□□ -0.3
Nfkb1P25799 Gm27320-201ENSMUST00000184892 109 ntBASIC13.19□□□□□ -0.3
Nfkb1P25799 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.19□□□□□ -0.3
Nfkb1P25799 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.19□□□□□ -0.3
Nfkb1P25799 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.19□□□□□ -0.3
Nfkb1P25799 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Gm21769-201ENSMUST00000211922 111 ntBASIC13.19□□□□□ -0.3
Nfkb1P25799 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nfkb1P25799 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nfkb1P25799 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Nfkb1P25799 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.19□□□□□ -0.3
Nfkb1P25799 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.19□□□□□ -0.3
Nfkb1P25799 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.19□□□□□ -0.3
Nfkb1P25799 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nfkb1P25799 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nfkb1P25799 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nfkb1P25799 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nfkb1P25799 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nfkb1P25799 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nfkb1P25799 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nfkb1P25799 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.18□□□□□ -0.3
Nfkb1P25799 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nfkb1P25799 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nfkb1P25799 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nfkb1P25799 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nfkb1P25799 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nfkb1P25799 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nfkb1P25799 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.18□□□□□ -0.3
Nfkb1P25799 Gm17376-201ENSMUST00000166016 84 ntBASIC13.18□□□□□ -0.3
Nfkb1P25799 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.18□□□□□ -0.3
Nfkb1P25799 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC13.18□□□□□ -0.3
Nfkb1P25799 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nfkb1P25799 Gm5904-201ENSMUST00000210286 865 ntBASIC13.18□□□□□ -0.3
Nfkb1P25799 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.18□□□□□ -0.3
Nfkb1P25799 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.18□□□□□ -0.3
Nfkb1P25799 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Nfkb1P25799 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nfkb1P25799 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nfkb1P25799 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nfkb1P25799 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nfkb1P25799 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.18□□□□□ -0.3
Nfkb1P25799 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nfkb1P25799 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.18□□□□□ -0.3
Nfkb1P25799 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.18□□□□□ -0.3
Nfkb1P25799 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nfkb1P25799 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nfkb1P25799 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nfkb1P25799 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nfkb1P25799 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Nfkb1P25799 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nfkb1P25799 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nfkb1P25799 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nfkb1P25799 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.17□□□□□ -0.3
Nfkb1P25799 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nfkb1P25799 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nfkb1P25799 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nfkb1P25799 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nfkb1P25799 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nfkb1P25799 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nfkb1P25799 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nfkb1P25799 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nfkb1P25799 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nfkb1P25799 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nfkb1P25799 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nfkb1P25799 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nfkb1P25799 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nfkb1P25799 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nfkb1P25799 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nfkb1P25799 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nfkb1P25799 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nfkb1P25799 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.17□□□□□ -0.3
Nfkb1P25799 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.17□□□□□ -0.3
Nfkb1P25799 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.17□□□□□ -0.3
Nfkb1P25799 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.17□□□□□ -0.3
Nfkb1P25799 Gm38092-201ENSMUST00000195600 653 ntBASIC13.17□□□□□ -0.3
Nfkb1P25799 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.17□□□□□ -0.3
Nfkb1P25799 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.17□□□□□ -0.3
Nfkb1P25799 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.17□□□□□ -0.3
Nfkb1P25799 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nfkb1P25799 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.17□□□□□ -0.3
Nfkb1P25799 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nfkb1P25799 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms