Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6bP23440 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6bP23440 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6bP23440 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6bP23440 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6bP23440 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.03□□□□□ -0.16
Pde6bP23440 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.03□□□□□ -0.16
Pde6bP23440 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6bP23440 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.03□□□□□ -0.16
Pde6bP23440 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6bP23440 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6bP23440 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6bP23440 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6bP23440 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Pde6bP23440 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6bP23440 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6bP23440 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.03□□□□□ -0.16
Pde6bP23440 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pde6bP23440 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6bP23440 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pde6bP23440 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6bP23440 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6bP23440 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6bP23440 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6bP23440 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Pde6bP23440 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6bP23440 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6bP23440 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.02□□□□□ -0.16
Pde6bP23440 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pde6bP23440 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6bP23440 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6bP23440 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6bP23440 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6bP23440 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6bP23440 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6bP23440 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6bP23440 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pde6bP23440 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6bP23440 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
Pde6bP23440 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6bP23440 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Pde6bP23440 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6bP23440 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6bP23440 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Pde6bP23440 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.02□□□□□ -0.17
Pde6bP23440 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6bP23440 AC153937.1-201ENSMUST00000218734 412 ntBASIC14.02□□□□□ -0.17
Pde6bP23440 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6bP23440 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Pde6bP23440 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6bP23440 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6bP23440 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Pde6bP23440 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6bP23440 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.02□□□□□ -0.17
Pde6bP23440 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6bP23440 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6bP23440 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6bP23440 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.02□□□□□ -0.17
Pde6bP23440 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.02□□□□□ -0.17
Pde6bP23440 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Pde6bP23440 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6bP23440 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6bP23440 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Pde6bP23440 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.01□□□□□ -0.17
Pde6bP23440 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pde6bP23440 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pde6bP23440 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pde6bP23440 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Pde6bP23440 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pde6bP23440 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pde6bP23440 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.01□□□□□ -0.17
Pde6bP23440 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6bP23440 Gm6015-201ENSMUST00000217493 1586 ntBASIC14□□□□□ -0.17
Pde6bP23440 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms