Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Gm22018-201ENSMUST00000104357 131 ntBASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Gm13342-201ENSMUST00000121055 207 ntBASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Gm27331-201ENSMUST00000183705 60 ntBASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Gm44397-201ENSMUST00000195950 113 ntBASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Gm43037-201ENSMUST00000196808 250 ntBASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Gm44364-201ENSMUST00000198368 141 ntBASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Gm43222-201ENSMUST00000199013 603 ntBASIC10.66□□□□□ -0.7
Tnfrsf9P20334 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Gm8598-201ENSMUST00000221184 836 ntBASIC10.66□□□□□ -0.7
Tnfrsf9P20334 AC154252.1-201ENSMUST00000226041 473 ntBASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Hprt-201ENSMUST00000026723 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Gm25131-201ENSMUST00000082653 151 ntBASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Gm13437-201ENSMUST00000122434 1981 ntBASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tnfrsf9P20334 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Gm12626-201ENSMUST00000117339 1983 ntBASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Gm12623-201ENSMUST00000119849 1983 ntBASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Gm1335-201ENSMUST00000121653 386 ntBASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Gm38223-201ENSMUST00000194484 695 ntBASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Gm6334-201ENSMUST00000207083 228 ntBASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Gm29705-201ENSMUST00000212598 474 ntBASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 AC129597.1-201ENSMUST00000223046 1234 ntBASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Mettl6-204ENSMUST00000227595 1027 ntBASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Tnfrsf9P20334 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms