Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopeO89079 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopeO89079 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.23□□□□□ -0.29
CopeO89079 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CopeO89079 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.23□□□□□ -0.29
CopeO89079 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CopeO89079 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CopeO89079 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CopeO89079 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CopeO89079 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CopeO89079 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CopeO89079 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CopeO89079 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CopeO89079 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CopeO89079 Gm16202-201ENSMUST00000117532 544 ntBASIC13.22□□□□□ -0.29
CopeO89079 Gm13689-201ENSMUST00000119360 685 ntBASIC13.22□□□□□ -0.29
CopeO89079 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.22□□□□□ -0.29
CopeO89079 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CopeO89079 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CopeO89079 Gm44124-201ENSMUST00000204159 472 ntBASIC13.22□□□□□ -0.29
CopeO89079 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.22□□□□□ -0.29
CopeO89079 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.22□□□□□ -0.29
CopeO89079 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CopeO89079 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CopeO89079 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CopeO89079 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CopeO89079 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CopeO89079 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CopeO89079 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
CopeO89079 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CopeO89079 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CopeO89079 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CopeO89079 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CopeO89079 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CopeO89079 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CopeO89079 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CopeO89079 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CopeO89079 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CopeO89079 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopeO89079 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopeO89079 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CopeO89079 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopeO89079 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopeO89079 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopeO89079 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.21□□□□□ -0.29
CopeO89079 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopeO89079 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopeO89079 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopeO89079 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.21□□□□□ -0.29
CopeO89079 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopeO89079 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopeO89079 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopeO89079 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CopeO89079 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
CopeO89079 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CopeO89079 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopeO89079 Gm13813-201ENSMUST00000120998 787 ntBASIC13.21□□□□□ -0.29
CopeO89079 Gm14719-201ENSMUST00000121891 340 ntBASIC13.21□□□□□ -0.29
CopeO89079 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CopeO89079 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopeO89079 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopeO89079 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.21□□□□□ -0.29
CopeO89079 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.21□□□□□ -0.29
CopeO89079 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopeO89079 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopeO89079 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CopeO89079 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CopeO89079 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopeO89079 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopeO89079 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CopeO89079 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CopeO89079 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.21□□□□□ -0.3
CopeO89079 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.21□□□□□ -0.3
CopeO89079 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CopeO89079 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
CopeO89079 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CopeO89079 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CopeO89079 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CopeO89079 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CopeO89079 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CopeO89079 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CopeO89079 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CopeO89079 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CopeO89079 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopeO89079 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopeO89079 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
CopeO89079 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CopeO89079 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopeO89079 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.2□□□□□ -0.3
CopeO89079 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.2□□□□□ -0.3
CopeO89079 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopeO89079 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopeO89079 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopeO89079 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopeO89079 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CopeO89079 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CopeO89079 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CopeO89079 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CopeO89079 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.2□□□□□ -0.3
CopeO89079 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms